Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.2■■□□□ 1.14
ZFYVE28Q9HCC9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZFYVE28Q9HCC9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZFYVE28Q9HCC9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZFYVE28Q9HCC9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 AC079834.2-201ENST00000609776 1949 ntBASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 BX276092.5-203ENST00000456199 560 ntBASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 AL121672.3-201ENST00000608644 468 ntBASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 GPALPP1-207ENST00000611650 899 ntBASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFYVE28Q9HCC9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 UNC93B7-201ENST00000509439 705 ntBASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZFYVE28Q9HCC9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.16■■□□□ 1.14
ZFYVE28Q9HCC9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 KRT8P11-201ENST00000409686 1436 ntBASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 RASA4DP-201ENST00000460726 1199 ntBASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 AC034232.1-201ENST00000506026 1064 ntBASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 AC011498.5-201ENST00000592027 486 ntBASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ZFYVE28Q9HCC9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZFYVE28Q9HCC9 AC016734.2-201ENST00000624325 1377 ntBASIC22.14■■□□□ 1.14
ZFYVE28Q9HCC9 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.14■■□□□ 1.14
ZFYVE28Q9HCC9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.14
ZFYVE28Q9HCC9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZFYVE28Q9HCC9 AC092597.1-201ENST00000487352 616 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms