Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BCAS3Q9H6U6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 AC073508.3-201ENST00000619697 1419 ntBASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 AC004951.3-201ENST00000418645 1148 ntBASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 AP005242.2-201ENST00000580065 1175 ntBASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.84■■□□□ 1.09
BCAS3Q9H6U6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 AL158211.5-201ENST00000623583 2518 ntBASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 AC010203.1-204ENST00000548782 407 ntBASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BCAS3Q9H6U6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BCAS3Q9H6U6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
BCAS3Q9H6U6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 TERF1P1-201ENST00000311003 1181 ntBASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 DGCR10-201ENST00000609839 495 ntBASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.82■■□□□ 1.08
BCAS3Q9H6U6 KRT18P22-201ENST00000402024 1347 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 AC113347.1-201ENST00000413321 391 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 SLC25A3P1-201ENST00000443844 931 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 AL160286.2-201ENST00000567150 934 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 AC092865.7-201ENST00000641832 219 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.81■■□□□ 1.08
BCAS3Q9H6U6 KRT8P41-201ENST00000533985 1514 ntBASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms