Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHMP4BQ9H444 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 ESRRAP1-201ENST00000400596 1257 ntBASIC24.44■■□□□ 1.5
CHMP4BQ9H444 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHMP4BQ9H444 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 AC018445.3-201ENST00000624177 1945 ntBASIC24.43■■□□□ 1.5
CHMP4BQ9H444 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHMP4BQ9H444 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 AC141586.3-201ENST00000562166 1838 ntBASIC24.42■■□□□ 1.5
CHMP4BQ9H444 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CHMP4BQ9H444 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHMP4BQ9H444 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 C1QL1P1-201ENST00000568105 661 ntBASIC24.4■■□□□ 1.5
CHMP4BQ9H444 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.4■■□□□ 1.5
CHMP4BQ9H444 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CHMP4BQ9H444 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHMP4BQ9H444 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CHMP4BQ9H444 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms