Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.49■□□□□ 0.71
VPS11Q9H270 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS11Q9H270 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS11Q9H270 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 AC018553.1-201ENST00000616682 1458 ntBASIC19.48■□□□□ 0.71
VPS11Q9H270 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS11Q9H270 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
VPS11Q9H270 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS11Q9H270 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VPS11Q9H270 LSM12P1-201ENST00000411836 588 ntBASIC19.48■□□□□ 0.71
VPS11Q9H270 AL512625.2-201ENST00000417533 625 ntBASIC19.48■□□□□ 0.71
VPS11Q9H270 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
VPS11Q9H270 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS11Q9H270 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.48■□□□□ 0.71
VPS11Q9H270 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS11Q9H270 AC005181.1-201ENST00000604782 1256 ntBASIC19.48■□□□□ 0.71
VPS11Q9H270 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VPS11Q9H270 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS11Q9H270 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS11Q9H270 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.47■□□□□ 0.71
VPS11Q9H270 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS11Q9H270 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 AL161938.1-201ENST00000569833 2180 ntBASIC19.47■□□□□ 0.71
VPS11Q9H270 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VPS11Q9H270 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS11Q9H270 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS11Q9H270 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 AC007613.1-201ENST00000572811 2597 ntBASIC19.46■□□□□ 0.71
VPS11Q9H270 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS11Q9H270 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS11Q9H270 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VPS11Q9H270 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS11Q9H270 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 AL162430.1-201ENST00000480705 870 ntBASIC19.46■□□□□ 0.71
VPS11Q9H270 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.46■□□□□ 0.71
VPS11Q9H270 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS11Q9H270 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS11Q9H270 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS11Q9H270 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS11Q9H270 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS11Q9H270 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS11Q9H270 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VPS11Q9H270 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VPS11Q9H270 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.45■□□□□ 0.7
VPS11Q9H270 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS11Q9H270 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS11Q9H270 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms