Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CYSTM1Q9H1C7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 AC011484.1-201ENST00000377652 1995 ntBASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 DBET-201ENST00000630918 3363 ntBASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 AC105020.1-201ENST00000435356 2205 ntBASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 TSPY26P-202ENST00000565928 3884 ntBASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC11.3□□□□□ -0.6
CYSTM1Q9H1C7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 Z98044.1-201ENST00000632503 1764 ntBASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 AC009102.2-201ENST00000606772 1639 ntBASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.29□□□□□ -0.6
CYSTM1Q9H1C7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CYSTM1Q9H1C7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CYSTM1Q9H1C7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms