Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 AP002982.1-201ENST00000492365 877 ntBASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 AL353708.3-201ENST00000610272 989 ntBASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 HLA-A-209ENST00000638375 975 ntBASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 AL135905.2-201ENST00000584934 1404 ntBASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR1EQ9GZS1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 NIFKP9-201ENST00000419265 221 ntBASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR1EQ9GZS1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 AC104417.2-201ENST00000562989 1793 ntBASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 Z82202.1-201ENST00000623446 1880 ntBASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR1EQ9GZS1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
POLR1EQ9GZS1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 AF186192.3-201ENST00000583427 947 ntBASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR1EQ9GZS1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms