Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 YWHAZP1-201ENST00000556286 722 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC002069.2-201ENST00000603580 883 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC116651.1-201ENST00000609724 556 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC021755.4-201ENST00000616620 456 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AC008115.4-201ENST00000619780 775 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 AP002782.1-201ENST00000623107 614 ntBASIC11.98□□□□□ -0.49
KRTAP3-3Q9BYR6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC008536.3-201ENST00000623282 1599 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 OR5H2-201ENST00000355273 945 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 RNU6-1283P-201ENST00000365314 105 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 USP9YP26-201ENST00000421008 661 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 OR13D2P-201ENST00000430667 907 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 ARPC3P1-201ENST00000437218 533 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 RPS23-204ENST00000507980 836 ntTSL 2 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 OR5BM1P-201ENST00000512021 366 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 MIR548S-201ENST00000581352 82 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AL121652.1-201ENST00000608851 448 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 U6atac.1-201ENST00000616025 117 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC095038.2-201ENST00000621464 1070 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 AC100774.1-201ENST00000565581 1603 ntBASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC11.97□□□□□ -0.49
KRTAP3-3Q9BYR6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AL645568.2-201ENST00000432815 1337 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC098818.2-201ENST00000564925 2320 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CLRN3-201ENST00000368671 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AL035698.1-201ENST00000405812 564 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC02246-201ENST00000412426 991 ntTSL 5 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 NAP1L4P3-201ENST00000432820 1147 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 RBMY2HP-201ENST00000457961 720 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AF111169.1-201ENST00000469811 374 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 ARL4AP2-201ENST00000507378 601 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC090579.1-201ENST00000518591 504 ntTSL 4 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AP006261.1-201ENST00000584783 668 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC104307.1-201ENST00000616142 196 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 AC097460.3-201ENST00000623099 442 ntBASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC11.96□□□□□ -0.49
KRTAP3-3Q9BYR6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 AC142381.3-201ENST00000568208 1670 ntBASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
KRTAP3-3Q9BYR6 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms