Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.99■□□□□ 0.31
COL12A1Q99715 CA15P1-201ENST00000481698 905 ntBASIC16.99■□□□□ 0.31
COL12A1Q99715 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL12A1Q99715 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL12A1Q99715 AL024507.2-201ENST00000606070 2574 ntBASIC16.99■□□□□ 0.31
COL12A1Q99715 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL12A1Q99715 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.99■□□□□ 0.31
COL12A1Q99715 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.99■□□□□ 0.31
COL12A1Q99715 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.99■□□□□ 0.31
COL12A1Q99715 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL12A1Q99715 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.99■□□□□ 0.31
COL12A1Q99715 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.99■□□□□ 0.31
COL12A1Q99715 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.99■□□□□ 0.31
COL12A1Q99715 AC116351.2-201ENST00000606540 1585 ntBASIC16.99■□□□□ 0.31
COL12A1Q99715 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL12A1Q99715 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL12A1Q99715 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.98■□□□□ 0.31
COL12A1Q99715 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 FOSL1P1-201ENST00000511041 816 ntBASIC16.98■□□□□ 0.31
COL12A1Q99715 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COL12A1Q99715 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
COL12A1Q99715 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.98■□□□□ 0.31
COL12A1Q99715 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 AC140113.2-201ENST00000604370 208 ntBASIC16.98■□□□□ 0.31
COL12A1Q99715 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
COL12A1Q99715 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.98■□□□□ 0.31
COL12A1Q99715 HLA-A-209ENST00000638375 975 ntBASIC16.98■□□□□ 0.31
COL12A1Q99715 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.98■□□□□ 0.31
COL12A1Q99715 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.98■□□□□ 0.31
COL12A1Q99715 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL12A1Q99715 TSSC2-201ENST00000450217 709 ntBASIC16.98■□□□□ 0.31
COL12A1Q99715 TPSP2-201ENST00000561760 610 ntBASIC16.98■□□□□ 0.31
COL12A1Q99715 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.97■□□□□ 0.31
COL12A1Q99715 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 SAPCD2P3-201ENST00000455031 850 ntBASIC16.97■□□□□ 0.31
COL12A1Q99715 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.97■□□□□ 0.31
COL12A1Q99715 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.97■□□□□ 0.31
COL12A1Q99715 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.97■□□□□ 0.31
COL12A1Q99715 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.97■□□□□ 0.31
COL12A1Q99715 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.97■□□□□ 0.31
COL12A1Q99715 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.97■□□□□ 0.31
COL12A1Q99715 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.97■□□□□ 0.31
COL12A1Q99715 AL773604.1-201ENST00000617417 272 ntBASIC16.97■□□□□ 0.31
COL12A1Q99715 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL12A1Q99715 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.97■□□□□ 0.31
COL12A1Q99715 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL12A1Q99715 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COL12A1Q99715 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.96■□□□□ 0.31
COL12A1Q99715 REXO1L6P-202ENST00000619970 1078 ntBASIC16.96■□□□□ 0.31
COL12A1Q99715 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COL12A1Q99715 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.96■□□□□ 0.31
COL12A1Q99715 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL12A1Q99715 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.96■□□□□ 0.31
COL12A1Q99715 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.96■□□□□ 0.31
COL12A1Q99715 PGAM5P1-201ENST00000518923 814 ntBASIC16.96■□□□□ 0.31
COL12A1Q99715 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.96■□□□□ 0.31
COL12A1Q99715 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL12A1Q99715 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.96■□□□□ 0.31
COL12A1Q99715 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL12A1Q99715 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL12A1Q99715 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL12A1Q99715 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.96■□□□□ 0.3
COL12A1Q99715 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.96■□□□□ 0.3
COL12A1Q99715 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL12A1Q99715 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.95■□□□□ 0.3
COL12A1Q99715 HTR5BP-201ENST00000430851 1154 ntBASIC16.95■□□□□ 0.3
COL12A1Q99715 AP000867.3-201ENST00000524675 377 ntBASIC16.95■□□□□ 0.3
COL12A1Q99715 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL12A1Q99715 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL12A1Q99715 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL12A1Q99715 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.95■□□□□ 0.3
COL12A1Q99715 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL12A1Q99715 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.95■□□□□ 0.3
COL12A1Q99715 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL12A1Q99715 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms