Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDCA3Q99618 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDCA3Q99618 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.21■□□□□ 0.83
CDCA3Q99618 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 AL645929.1-201ENST00000420084 975 ntBASIC20.21■□□□□ 0.83
CDCA3Q99618 SPDYE13P-201ENST00000445314 798 ntBASIC20.21■□□□□ 0.83
CDCA3Q99618 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.21■□□□□ 0.83
CDCA3Q99618 PRELID1P1-202ENST00000567272 903 ntBASIC20.21■□□□□ 0.83
CDCA3Q99618 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.21■□□□□ 0.83
CDCA3Q99618 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA3Q99618 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA3Q99618 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.2■□□□□ 0.82
CDCA3Q99618 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.2■□□□□ 0.82
CDCA3Q99618 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA3Q99618 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 AC092119.3-201ENST00000612618 583 ntBASIC20.2■□□□□ 0.82
CDCA3Q99618 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDCA3Q99618 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.2■□□□□ 0.82
CDCA3Q99618 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.2■□□□□ 0.82
CDCA3Q99618 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA3Q99618 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA3Q99618 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA3Q99618 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDCA3Q99618 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 AC092329.2-201ENST00000598402 547 ntBASIC20.19■□□□□ 0.82
CDCA3Q99618 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA3Q99618 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDCA3Q99618 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDCA3Q99618 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA3Q99618 EP400NL-214ENST00000641289 2402 ntBASIC20.18■□□□□ 0.82
CDCA3Q99618 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.18■□□□□ 0.82
CDCA3Q99618 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA3Q99618 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA3Q99618 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA3Q99618 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.18■□□□□ 0.82
CDCA3Q99618 AC111152.3-201ENST00000569699 673 ntBASIC20.18■□□□□ 0.82
CDCA3Q99618 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA3Q99618 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA3Q99618 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.18■□□□□ 0.82
CDCA3Q99618 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA3Q99618 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA3Q99618 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA3Q99618 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA3Q99618 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.17■□□□□ 0.82
CDCA3Q99618 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA3Q99618 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA3Q99618 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA3Q99618 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA3Q99618 TSPY21P-201ENST00000433481 731 ntBASIC20.17■□□□□ 0.82
CDCA3Q99618 TSPY23P-201ENST00000440136 739 ntBASIC20.17■□□□□ 0.82
CDCA3Q99618 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
CDCA3Q99618 RASA4DP-201ENST00000460726 1199 ntBASIC20.17■□□□□ 0.82
CDCA3Q99618 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.17■□□□□ 0.82
CDCA3Q99618 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.17■□□□□ 0.82
CDCA3Q99618 CR769767.2-201ENST00000622735 460 ntBASIC20.17■□□□□ 0.82
CDCA3Q99618 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA3Q99618 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms