Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3BQ96NU0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3BQ96NU0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.52■□□□□ 0.55
CNTNAP3BQ96NU0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNTNAP3BQ96NU0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 KRT18P31-201ENST00000506277 1292 ntBASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 FOSL1P1-201ENST00000511041 816 ntBASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 TERC-201ENST00000602385 541 ntBASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 AC055717.3-201ENST00000622967 595 ntBASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3BQ96NU0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 SPDYE15P-201ENST00000424157 909 ntBASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 AC011498.5-201ENST00000592027 486 ntBASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.5■□□□□ 0.55
CNTNAP3BQ96NU0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 AP000523.1-201ENST00000398242 1049 ntBASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 MIR940-201ENST00000401276 94 ntBASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 RASA4DP-201ENST00000460726 1199 ntBASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 HLA-J-202ENST00000469281 1241 ntBASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3BQ96NU0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 GCSHP2-201ENST00000560971 527 ntBASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.48■□□□□ 0.55
CNTNAP3BQ96NU0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms