Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 REXO1L6P-202ENST00000619970 1078 ntBASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRUNE2Q8WUY3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 RASA4DP-201ENST00000460726 1199 ntBASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 AL024507.2-201ENST00000606070 2574 ntBASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 CHCHD2P8-201ENST00000429873 447 ntBASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 AL353801.3-201ENST00000609898 542 ntBASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 AC116351.2-201ENST00000606540 1585 ntBASIC20.31■□□□□ 0.84
PRUNE2Q8WUY3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 HLA-G-202ENST00000376815 851 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 PGAM5P1-201ENST00000518923 814 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 AL773604.1-201ENST00000617417 272 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 DRAXINP1-201ENST00000437611 948 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 AC140113.2-201ENST00000604370 208 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 MIR940-201ENST00000401276 94 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 AP001160.2-201ENST00000596071 487 ntBASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.3■□□□□ 0.84
PRUNE2Q8WUY3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 AP000867.3-201ENST00000524675 377 ntBASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.29■□□□□ 0.84
PRUNE2Q8WUY3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 HLA-F-220ENST00000434407 884 ntBASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRUNE2Q8WUY3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRUNE2Q8WUY3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms