Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACTRT1Q8TDG2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 AL512353.2-201ENST00000448759 1962 ntBASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTRT1Q8TDG2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 AC073210.2-201ENST00000430369 194 ntBASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 AC087623.3-201ENST00000607047 1098 ntBASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTRT1Q8TDG2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 IRX1P1-201ENST00000438849 1838 ntBASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTRT1Q8TDG2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 LSM12P1-201ENST00000411836 588 ntBASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 BICD1-207ENST00000551848 1962 ntBASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTRT1Q8TDG2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms