Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.3■□□□□ 0.52
SNIP1Q8TAD8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 FDX1P1-201ENST00000449115 551 ntBASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 AC007375.3-201ENST00000600936 2314 ntBASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNIP1Q8TAD8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 TSPY21P-201ENST00000433481 731 ntBASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 TSPY23P-201ENST00000440136 739 ntBASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
SNIP1Q8TAD8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 STARP1-201ENST00000397973 869 ntBASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 RN7SL510P-201ENST00000581311 263 ntBASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 NPAP1P7-201ENST00000613027 823 ntBASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 HYMAI.1-201ENST00000620949 238 ntBASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNIP1Q8TAD8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNIP1Q8TAD8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 AP003041.3-201ENST00000527151 707 ntBASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms