Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 AL158211.5-201ENST00000623583 2518 ntBASIC22.58■■□□□ 1.21
PNMA1Q8ND90 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 UNC93B2-201ENST00000285383 730 ntBASIC22.58■■□□□ 1.21
PNMA1Q8ND90 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.58■■□□□ 1.21
PNMA1Q8ND90 AC079598.2-202ENST00000546624 1451 ntBASIC22.58■■□□□ 1.2
PNMA1Q8ND90 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PNMA1Q8ND90 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 AC004951.3-201ENST00000418645 1148 ntBASIC22.57■■□□□ 1.2
PNMA1Q8ND90 AC008040.2-201ENST00000461049 708 ntBASIC22.57■■□□□ 1.2
PNMA1Q8ND90 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 AC130371.2-201ENST00000619443 611 ntBASIC22.57■■□□□ 1.2
PNMA1Q8ND90 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PNMA1Q8ND90 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 AP000525.1-201ENST00000608286 694 ntBASIC22.56■■□□□ 1.2
PNMA1Q8ND90 AC011298.2-201ENST00000617989 482 ntBASIC22.56■■□□□ 1.2
PNMA1Q8ND90 AC073912.3-201ENST00000624414 853 ntBASIC22.56■■□□□ 1.2
PNMA1Q8ND90 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
PNMA1Q8ND90 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 AC091390.4-202ENST00000476426 537 ntBASIC22.55■■□□□ 1.2
PNMA1Q8ND90 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 KRT8P41-201ENST00000533985 1514 ntBASIC22.55■■□□□ 1.2
PNMA1Q8ND90 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PNMA1Q8ND90 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PNMA1Q8ND90 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms