Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.85■□□□□ 0.77
SIX5Q8N196 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX5Q8N196 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX5Q8N196 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX5Q8N196 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX5Q8N196 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.85■□□□□ 0.77
SIX5Q8N196 CA15P1-201ENST00000481698 905 ntBASIC19.85■□□□□ 0.77
SIX5Q8N196 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.85■□□□□ 0.77
SIX5Q8N196 AC083849.1-201ENST00000615227 514 ntBASIC19.85■□□□□ 0.77
SIX5Q8N196 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.85■□□□□ 0.77
SIX5Q8N196 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX5Q8N196 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.85■□□□□ 0.77
SIX5Q8N196 KRT8P45-201ENST00000414328 1447 ntBASIC19.85■□□□□ 0.77
SIX5Q8N196 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX5Q8N196 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.84■□□□□ 0.77
SIX5Q8N196 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX5Q8N196 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.84■□□□□ 0.77
SIX5Q8N196 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SIX5Q8N196 ATP5G2P1-201ENST00000433580 426 ntBASIC19.84■□□□□ 0.77
SIX5Q8N196 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.84■□□□□ 0.77
SIX5Q8N196 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.84■□□□□ 0.77
SIX5Q8N196 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.84■□□□□ 0.77
SIX5Q8N196 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX5Q8N196 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SIX5Q8N196 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX5Q8N196 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX5Q8N196 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX5Q8N196 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX5Q8N196 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.83■□□□□ 0.77
SIX5Q8N196 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX5Q8N196 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX5Q8N196 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX5Q8N196 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SIX5Q8N196 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX5Q8N196 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SIX5Q8N196 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX5Q8N196 TSPY21P-201ENST00000433481 731 ntBASIC19.83■□□□□ 0.77
SIX5Q8N196 TSPY23P-201ENST00000440136 739 ntBASIC19.83■□□□□ 0.77
SIX5Q8N196 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX5Q8N196 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SIX5Q8N196 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX5Q8N196 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.83■□□□□ 0.76
SIX5Q8N196 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.82■□□□□ 0.76
SIX5Q8N196 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.82■□□□□ 0.76
SIX5Q8N196 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SIX5Q8N196 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 AP000523.1-201ENST00000398242 1049 ntBASIC19.82■□□□□ 0.76
SIX5Q8N196 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SIX5Q8N196 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 LINC01311-201ENST00000565162 1445 ntBASIC19.82■□□□□ 0.76
SIX5Q8N196 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIX5Q8N196 EP400NL-214ENST00000641289 2402 ntBASIC19.82■□□□□ 0.76
SIX5Q8N196 ECEL1P1-201ENST00000373592 1742 ntBASIC19.82■□□□□ 0.76
SIX5Q8N196 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX5Q8N196 FP700111.2-201ENST00000619190 1892 ntBASIC19.82■□□□□ 0.76
SIX5Q8N196 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SIX5Q8N196 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX5Q8N196 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SIX5Q8N196 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.81■□□□□ 0.76
SIX5Q8N196 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX5Q8N196 RN7SL510P-201ENST00000581311 263 ntBASIC19.81■□□□□ 0.76
SIX5Q8N196 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIX5Q8N196 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SIX5Q8N196 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIX5Q8N196 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX5Q8N196 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SIX5Q8N196 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX5Q8N196 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX5Q8N196 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms