Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 AL671277.2-201ENST00000458060 996 ntBASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 AL441883.1-201ENST00000566170 1045 ntBASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEFF1Q8IYR6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEFF1Q8IYR6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEFF1Q8IYR6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEFF1Q8IYR6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEFF1Q8IYR6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 TPM4P1-201ENST00000436100 807 ntBASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEFF1Q8IYR6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AP003041.3-201ENST00000527151 707 ntBASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEFF1Q8IYR6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 CA15P1-201ENST00000481698 905 ntBASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms