Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COLCA1Q6ZS62 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 TEX21P-204ENST00000641479 1693 ntBASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 RPPH1-201ENST00000516869 333 ntBASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 C1QBPP2-201ENST00000528754 825 ntBASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLCA1Q6ZS62 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.68■□□□□ 0.26
COLCA1Q6ZS62 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AL160286.2-201ENST00000567150 934 ntBASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 AL353708.3-201ENST00000610272 989 ntBASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.67■□□□□ 0.26
COLCA1Q6ZS62 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms