Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AC092338.2-201ENST00000568827 1415 ntBASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 AC007663.1-201ENST00000438948 1240 ntBASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 NTF6B-201ENST00000591913 560 ntBASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 AL138966.2-201ENST00000621997 464 ntBASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC62Q6P9F0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 BX664615.1-201ENST00000443558 458 ntBASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 CCR12P-201ENST00000446203 998 ntBASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 WWOX-216ENST00000569818 525 ntBASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC62Q6P9F0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 AC010653.2-201ENST00000623505 997 ntBASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC62Q6P9F0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC62Q6P9F0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC62Q6P9F0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC62Q6P9F0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms