Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 AC034105.1-201ENST00000563488 319 ntBASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 SNHG9-202ENST00000564014 471 ntBASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 AL008721.1-201ENST00000609964 604 ntBASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.92■■□□□ 1.1
COL13A1Q5TAT6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 AC004832.2-201ENST00000426397 482 ntBASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 HLA-F-220ENST00000434407 884 ntBASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 HNRNPDP1-201ENST00000439535 754 ntBASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 PTBP1P-201ENST00000554374 1601 ntBASIC21.91■■□□□ 1.1
COL13A1Q5TAT6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 AC190387.1-201ENST00000551683 408 ntBASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 AL606495.2-201ENST00000605867 535 ntBASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 IGHV3-41-201ENST00000613121 348 ntBASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL13A1Q5TAT6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.89■■□□□ 1.1
COL13A1Q5TAT6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.89■■□□□ 1.1
COL13A1Q5TAT6 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.89■■□□□ 1.1
COL13A1Q5TAT6 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 AC090616.6-201ENST00000582640 721 ntBASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.89■■□□□ 1.09
COL13A1Q5TAT6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
COL13A1Q5TAT6 KRT8P20-201ENST00000423953 1409 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms