Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 SLC25A24-204ENST00000569674 2357 ntBASIC20.53■□□□□ 0.88
VARS2Q5ST30 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VARS2Q5ST30 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.53■□□□□ 0.88
VARS2Q5ST30 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.52■□□□□ 0.88
VARS2Q5ST30 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.52■□□□□ 0.88
VARS2Q5ST30 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.52■□□□□ 0.88
VARS2Q5ST30 AC112907.3-201ENST00000577781 2400 ntBASIC20.52■□□□□ 0.88
VARS2Q5ST30 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 AC104076.2-201ENST00000448912 469 ntBASIC20.52■□□□□ 0.88
VARS2Q5ST30 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.52■□□□□ 0.88
VARS2Q5ST30 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARS2Q5ST30 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.52■□□□□ 0.88
VARS2Q5ST30 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VARS2Q5ST30 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
VARS2Q5ST30 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 HMGA1P5-201ENST00000412453 271 ntBASIC20.51■□□□□ 0.87
VARS2Q5ST30 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 AC007663.1-201ENST00000438948 1240 ntBASIC20.51■□□□□ 0.87
VARS2Q5ST30 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 AL023803.3-201ENST00000615559 522 ntBASIC20.51■□□□□ 0.87
VARS2Q5ST30 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VARS2Q5ST30 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARS2Q5ST30 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 DUX4L26-201ENST00000489078 1255 ntBASIC20.5■□□□□ 0.87
VARS2Q5ST30 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 CKBP1-201ENST00000565489 1086 ntBASIC20.5■□□□□ 0.87
VARS2Q5ST30 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 AC006011.2-201ENST00000621313 1158 ntBASIC20.5■□□□□ 0.87
VARS2Q5ST30 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 AC092338.2-201ENST00000568827 1415 ntBASIC20.5■□□□□ 0.87
VARS2Q5ST30 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms