Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 PKD1P1-201ENST00000458669 6805 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MIR663A-201ENST00000385250 93 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MIR935-201ENST00000401179 91 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 AC105036.2-201ENST00000569468 176 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 AC005332.8-201ENST00000622750 2735 ntBASIC14.81□□□□□ -0.04
HIST1H1AQ02539 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H1AQ02539 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 Z82202.1-201ENST00000623446 1880 ntBASIC14.8□□□□□ -0.04
HIST1H1AQ02539 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 AC092437.1-201ENST00000624794 1048 ntBASIC14.8□□□□□ -0.04
HIST1H1AQ02539 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 AP001271.2-201ENST00000624018 1556 ntBASIC14.8□□□□□ -0.04
HIST1H1AQ02539 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.8□□□□□ -0.04
HIST1H1AQ02539 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H1AQ02539 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AF201337.1-201ENST00000520239 748 ntBASIC14.79□□□□□ -0.04
HIST1H1AQ02539 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AC023632.3-201ENST00000521633 145 ntBASIC14.79□□□□□ -0.04
HIST1H1AQ02539 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AC133552.2-202ENST00000575694 574 ntBASIC14.79□□□□□ -0.04
HIST1H1AQ02539 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 PHGDH-210ENST00000641115 1638 ntBASIC14.79□□□□□ -0.04
HIST1H1AQ02539 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H1AQ02539 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms