Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3AP84243 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3AP84243 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H3F3AP84243 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
H3F3AP84243 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
H3F3AP84243 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3AP84243 NIFKP9-201ENST00000419265 221 ntBASIC17.34■□□□□ 0.37
H3F3AP84243 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3AP84243 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.34■□□□□ 0.37
H3F3AP84243 AC104417.2-201ENST00000562989 1793 ntBASIC17.34■□□□□ 0.37
H3F3AP84243 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3AP84243 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
H3F3AP84243 AF186192.3-201ENST00000583427 947 ntBASIC17.34■□□□□ 0.37
H3F3AP84243 AL135905.2-201ENST00000584934 1404 ntBASIC17.34■□□□□ 0.37
H3F3AP84243 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3AP84243 Z82202.1-201ENST00000623446 1880 ntBASIC17.34■□□□□ 0.37
H3F3AP84243 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
H3F3AP84243 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
H3F3AP84243 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
H3F3AP84243 AC093484.2-201ENST00000580996 2166 ntBASIC17.33■□□□□ 0.37
H3F3AP84243 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.33■□□□□ 0.37
H3F3AP84243 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3F3AP84243 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3F3AP84243 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.33■□□□□ 0.37
H3F3AP84243 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
H3F3AP84243 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.33■□□□□ 0.37
H3F3AP84243 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3F3AP84243 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.33■□□□□ 0.37
H3F3AP84243 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.33■□□□□ 0.36
H3F3AP84243 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.33■□□□□ 0.36
H3F3AP84243 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.33■□□□□ 0.36
H3F3AP84243 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.33■□□□□ 0.36
H3F3AP84243 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.33■□□□□ 0.36
H3F3AP84243 AL445675.2-201ENST00000620291 557 ntBASIC17.33■□□□□ 0.36
H3F3AP84243 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.33■□□□□ 0.36
H3F3AP84243 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.33■□□□□ 0.36
H3F3AP84243 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
H3F3AP84243 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3F3AP84243 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
H3F3AP84243 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
H3F3AP84243 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.32■□□□□ 0.36
H3F3AP84243 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.32■□□□□ 0.36
H3F3AP84243 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.32■□□□□ 0.36
H3F3AP84243 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.32■□□□□ 0.36
H3F3AP84243 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
H3F3AP84243 KSR1P1-201ENST00000446298 240 ntBASIC17.32■□□□□ 0.36
H3F3AP84243 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.32■□□□□ 0.36
H3F3AP84243 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.32■□□□□ 0.36
H3F3AP84243 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.32■□□□□ 0.36
H3F3AP84243 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.32■□□□□ 0.36
H3F3AP84243 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.32■□□□□ 0.36
H3F3AP84243 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
H3F3AP84243 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.32■□□□□ 0.36
H3F3AP84243 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.32■□□□□ 0.36
H3F3AP84243 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms