Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN20P56880 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN20P56880 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN20P56880 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN20P56880 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN20P56880 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 TCF3P1-201ENST00000423021 1937 ntBASIC17.76■□□□□ 0.43
CLDN20P56880 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 NBPF21P-201ENST00000425093 1451 ntBASIC17.76■□□□□ 0.43
CLDN20P56880 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN20P56880 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLDN20P56880 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN20P56880 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN20P56880 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLDN20P56880 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN20P56880 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN20P56880 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN20P56880 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 NEFHP1-201ENST00000412845 2629 ntBASIC17.76■□□□□ 0.43
CLDN20P56880 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLDN20P56880 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN20P56880 AC005082.1-201ENST00000413042 2259 ntBASIC17.75■□□□□ 0.43
CLDN20P56880 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN20P56880 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN20P56880 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN20P56880 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN20P56880 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLDN20P56880 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN20P56880 AC093827.2-201ENST00000512654 315 ntBASIC17.75■□□□□ 0.43
CLDN20P56880 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN20P56880 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN20P56880 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN20P56880 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN20P56880 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN20P56880 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CLDN20P56880 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN20P56880 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN20P56880 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.74■□□□□ 0.43
CLDN20P56880 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN20P56880 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.74■□□□□ 0.43
CLDN20P56880 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN20P56880 AP006294.2-201ENST00000641667 209 ntBASIC17.74■□□□□ 0.43
CLDN20P56880 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN20P56880 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN20P56880 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN20P56880 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN20P56880 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN20P56880 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.73■□□□□ 0.43
CLDN20P56880 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CLDN20P56880 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN20P56880 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 AP006587.1-201ENST00000534129 1502 ntBASIC17.73■□□□□ 0.43
CLDN20P56880 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN20P56880 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN20P56880 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLDN20P56880 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDN20P56880 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN20P56880 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN20P56880 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.73■□□□□ 0.43
CLDN20P56880 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN20P56880 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN20P56880 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN20P56880 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN20P56880 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms