Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.13■□□□□ 0.49
SMSP52788 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.13■□□□□ 0.49
SMSP52788 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 AC124016.1-201ENST00000609552 612 ntBASIC18.13■□□□□ 0.49
SMSP52788 AC010331.1-201ENST00000611423 582 ntBASIC18.13■□□□□ 0.49
SMSP52788 AC110285.5-201ENST00000611501 352 ntBASIC18.13■□□□□ 0.49
SMSP52788 AC120498.8-201ENST00000614275 531 ntBASIC18.13■□□□□ 0.49
SMSP52788 AL049637.2-201ENST00000641778 930 ntBASIC18.13■□□□□ 0.49
SMSP52788 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMSP52788 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMSP52788 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.13■□□□□ 0.49
SMSP52788 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 TSPY7P-201ENST00000431358 1114 ntBASIC18.12■□□□□ 0.49
SMSP52788 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.12■□□□□ 0.49
SMSP52788 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMSP52788 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.12■□□□□ 0.49
SMSP52788 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMSP52788 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMSP52788 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMSP52788 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.11■□□□□ 0.49
SMSP52788 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SMSP52788 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMSP52788 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMSP52788 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 KRT18P21-201ENST00000515767 1272 ntBASIC18.11■□□□□ 0.49
SMSP52788 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.11■□□□□ 0.49
SMSP52788 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.11■□□□□ 0.49
SMSP52788 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.11■□□□□ 0.49
SMSP52788 AC087633.2-202ENST00000565166 1439 ntBASIC18.11■□□□□ 0.49
SMSP52788 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMSP52788 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.11■□□□□ 0.49
SMSP52788 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMSP52788 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 AC138932.1-201ENST00000534164 6830 ntBASIC18.1■□□□□ 0.49
SMSP52788 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.1■□□□□ 0.49
SMSP52788 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMSP52788 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMSP52788 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms