Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 BX119927.1-201ENST00000636596 1552 ntBASIC16.93■□□□□ 0.3
HCFC1P51610 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HCFC1P51610 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.93■□□□□ 0.3
HCFC1P51610 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.93■□□□□ 0.3
HCFC1P51610 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.93■□□□□ 0.3
HCFC1P51610 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 AL441883.1-201ENST00000566170 1045 ntBASIC16.93■□□□□ 0.3
HCFC1P51610 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.93■□□□□ 0.3
HCFC1P51610 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.93■□□□□ 0.3
HCFC1P51610 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.93■□□□□ 0.3
HCFC1P51610 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.93■□□□□ 0.3
HCFC1P51610 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1P51610 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.92■□□□□ 0.3
HCFC1P51610 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HCFC1P51610 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.92■□□□□ 0.3
HCFC1P51610 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.92■□□□□ 0.3
HCFC1P51610 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 AC092667.1-201ENST00000434301 2586 ntBASIC16.92■□□□□ 0.3
HCFC1P51610 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.92■□□□□ 0.3
HCFC1P51610 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HCFC1P51610 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.92■□□□□ 0.3
HCFC1P51610 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HCFC1P51610 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC1P51610 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC1P51610 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC1P51610 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HCFC1P51610 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
HCFC1P51610 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.91■□□□□ 0.3
HCFC1P51610 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
HCFC1P51610 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 AC092338.2-201ENST00000568827 1415 ntBASIC16.91■□□□□ 0.3
HCFC1P51610 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HCFC1P51610 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.91■□□□□ 0.3
HCFC1P51610 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC1P51610 AL671277.2-201ENST00000458060 996 ntBASIC16.91■□□□□ 0.3
HCFC1P51610 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC1P51610 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.91■□□□□ 0.3
HCFC1P51610 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
HCFC1P51610 AL160286.2-201ENST00000567150 934 ntBASIC16.91■□□□□ 0.3
HCFC1P51610 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC1P51610 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC1P51610 FEM1AP1-201ENST00000431297 1995 ntBASIC16.91■□□□□ 0.3
HCFC1P51610 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 SMG8-203ENST00000578922 2178 ntBASIC16.9■□□□□ 0.3
HCFC1P51610 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HCFC1P51610 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HCFC1P51610 AL512604.3-201ENST00000569583 964 ntBASIC16.9■□□□□ 0.3
HCFC1P51610 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.9■□□□□ 0.3
HCFC1P51610 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC1P51610 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.9■□□□□ 0.3
HCFC1P51610 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HCFC1P51610 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 KRT8P41-201ENST00000533985 1514 ntBASIC16.9■□□□□ 0.3
HCFC1P51610 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HCFC1P51610 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms