Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC3P40938 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 AP001271.2-201ENST00000624018 1556 ntBASIC17.73■□□□□ 0.43
RFC3P40938 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RFC3P40938 AL162377.1-201ENST00000618844 1793 ntBASIC17.73■□□□□ 0.43
RFC3P40938 PCDHAC2-203ENST00000615316 3011 ntBASIC17.73■□□□□ 0.43
RFC3P40938 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC3P40938 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.73■□□□□ 0.43
RFC3P40938 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFC3P40938 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFC3P40938 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.72■□□□□ 0.43
RFC3P40938 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RFC3P40938 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC3P40938 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC3P40938 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 FSCN1P1-201ENST00000568912 1481 ntBASIC17.72■□□□□ 0.43
RFC3P40938 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC3P40938 LINC01568-207ENST00000641790 1380 ntBASIC17.72■□□□□ 0.43
RFC3P40938 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC3P40938 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 FITM1-202ENST00000559294 800 ntBASIC17.72■□□□□ 0.43
RFC3P40938 NAPSB-206ENST00000562112 1266 ntBASIC17.72■□□□□ 0.43
RFC3P40938 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.72■□□□□ 0.43
RFC3P40938 AC010331.1-201ENST00000611423 582 ntBASIC17.72■□□□□ 0.43
RFC3P40938 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.72■□□□□ 0.43
RFC3P40938 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 AC099778.1-201ENST00000568593 1911 ntBASIC17.72■□□□□ 0.43
RFC3P40938 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
RFC3P40938 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFC3P40938 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RFC3P40938 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RFC3P40938 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFC3P40938 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
RFC3P40938 RN7SL850P-201ENST00000579959 291 ntBASIC17.71■□□□□ 0.43
RFC3P40938 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.71■□□□□ 0.43
RFC3P40938 AC010947.1-201ENST00000623454 693 ntBASIC17.71■□□□□ 0.43
RFC3P40938 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFC3P40938 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RFC3P40938 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFC3P40938 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.71■□□□□ 0.42
RFC3P40938 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFC3P40938 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFC3P40938 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC3P40938 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RFC3P40938 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC3P40938 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFC3P40938 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC3P40938 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RFC3P40938 CRYGFP-201ENST00000418459 633 ntBASIC17.7■□□□□ 0.42
RFC3P40938 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFC3P40938 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.7■□□□□ 0.42
RFC3P40938 AC026271.3-201ENST00000571884 352 ntBASIC17.7■□□□□ 0.42
RFC3P40938 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 AC145285.6-201ENST00000604632 637 ntBASIC17.7■□□□□ 0.42
RFC3P40938 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 KRT8P8-201ENST00000434750 1448 ntBASIC17.7■□□□□ 0.42
RFC3P40938 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFC3P40938 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.7■□□□□ 0.42
RFC3P40938 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RFC3P40938 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms