Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.82■■□□□ 1.4
COL11A2P13942 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.82■■□□□ 1.4
COL11A2P13942 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
COL11A2P13942 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.82■■□□□ 1.4
COL11A2P13942 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
COL11A2P13942 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
COL11A2P13942 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.82■■□□□ 1.4
COL11A2P13942 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.81■■□□□ 1.4
COL11A2P13942 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.81■■□□□ 1.4
COL11A2P13942 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.81■■□□□ 1.4
COL11A2P13942 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
COL11A2P13942 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL11A2P13942 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.81■■□□□ 1.4
COL11A2P13942 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.81■■□□□ 1.4
COL11A2P13942 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.81■■□□□ 1.4
COL11A2P13942 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.81■■□□□ 1.4
COL11A2P13942 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL11A2P13942 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.81■■□□□ 1.4
COL11A2P13942 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL11A2P13942 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL11A2P13942 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A2P13942 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A2P13942 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A2P13942 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A2P13942 AC092597.1-201ENST00000487352 616 ntBASIC23.8■■□□□ 1.4
COL11A2P13942 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.8■■□□□ 1.4
COL11A2P13942 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.8■■□□□ 1.4
COL11A2P13942 AC023511.2-201ENST00000618803 211 ntBASIC23.8■■□□□ 1.4
COL11A2P13942 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL11A2P13942 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
COL11A2P13942 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.8■■□□□ 1.4
COL11A2P13942 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
COL11A2P13942 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.79■■□□□ 1.4
COL11A2P13942 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
COL11A2P13942 AC012676.1-201ENST00000574705 1949 ntBASIC23.79■■□□□ 1.4
COL11A2P13942 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.79■■□□□ 1.4
COL11A2P13942 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
COL11A2P13942 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.79■■□□□ 1.4
COL11A2P13942 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
COL11A2P13942 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL11A2P13942 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
COL11A2P13942 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
COL11A2P13942 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.78■■□□□ 1.4
COL11A2P13942 RASA4DP-201ENST00000460726 1199 ntBASIC23.78■■□□□ 1.4
COL11A2P13942 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.78■■□□□ 1.4
COL11A2P13942 MIR3652-201ENST00000579335 131 ntBASIC23.78■■□□□ 1.4
COL11A2P13942 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.78■■□□□ 1.4
COL11A2P13942 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.78■■□□□ 1.4
COL11A2P13942 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL11A2P13942 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.77■■□□□ 1.4
COL11A2P13942 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 AC026310.3-201ENST00000625186 2373 ntBASIC23.77■■□□□ 1.4
COL11A2P13942 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.77■■□□□ 1.4
COL11A2P13942 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.77■■□□□ 1.4
COL11A2P13942 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.77■■□□□ 1.4
COL11A2P13942 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
COL11A2P13942 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL11A2P13942 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.76■■□□□ 1.39
COL11A2P13942 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL11A2P13942 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms