Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
VTNP04004 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.28■■□□□ 1
VTNP04004 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
VTNP04004 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VTNP04004 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.27■■□□□ 1
VTNP04004 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.27■■□□□ 1
VTNP04004 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.27■■□□□ 1
VTNP04004 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.27■■□□□ 1
VTNP04004 AC128688.1-201ENST00000487626 519 ntBASIC21.27■■□□□ 1
VTNP04004 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.27■■□□□ 1
VTNP04004 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.27■■□□□ 1
VTNP04004 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.27■■□□□ 1
VTNP04004 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.27■■□□□ 1
VTNP04004 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.27■■□□□ 1
VTNP04004 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.27■□□□□ 0.99
VTNP04004 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
VTNP04004 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
VTNP04004 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VTNP04004 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.27■□□□□ 0.99
VTNP04004 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.27■□□□□ 0.99
VTNP04004 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VTNP04004 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.26■□□□□ 0.99
VTNP04004 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.26■□□□□ 0.99
VTNP04004 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.26■□□□□ 0.99
VTNP04004 LIN28AP1-201ENST00000429574 405 ntBASIC21.26■□□□□ 0.99
VTNP04004 KRT18P35-201ENST00000510488 1269 ntBASIC21.26■□□□□ 0.99
VTNP04004 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
VTNP04004 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.26■□□□□ 0.99
VTNP04004 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
VTNP04004 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTNP04004 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.26■□□□□ 0.99
VTNP04004 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
VTNP04004 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTNP04004 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.25■□□□□ 0.99
VTNP04004 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.25■□□□□ 0.99
VTNP04004 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
VTNP04004 ATP5G1P1-201ENST00000448724 379 ntBASIC21.25■□□□□ 0.99
VTNP04004 AC104076.2-201ENST00000448912 469 ntBASIC21.25■□□□□ 0.99
VTNP04004 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTNP04004 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.25■□□□□ 0.99
VTNP04004 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTNP04004 PCDHAC2-203ENST00000615316 3011 ntBASIC21.25■□□□□ 0.99
VTNP04004 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.24■□□□□ 0.99
VTNP04004 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.24■□□□□ 0.99
VTNP04004 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 AC116562.4-202ENST00000641738 218 ntBASIC21.24■□□□□ 0.99
VTNP04004 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.24■□□□□ 0.99
VTNP04004 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VTNP04004 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTNP04004 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.23■□□□□ 0.99
VTNP04004 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 CCR12P-201ENST00000446203 998 ntBASIC21.23■□□□□ 0.99
VTNP04004 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms