Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP1P01033 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP1P01033 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.02■□□□□ 0.96
TIMP1P01033 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP1P01033 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.02■□□□□ 0.96
TIMP1P01033 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.02■□□□□ 0.96
TIMP1P01033 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.02■□□□□ 0.96
TIMP1P01033 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.02■□□□□ 0.96
TIMP1P01033 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP1P01033 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
TIMP1P01033 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP1P01033 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TIMP1P01033 BX119927.1-201ENST00000636596 1552 ntBASIC21.02■□□□□ 0.95
TIMP1P01033 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TIMP1P01033 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMP1P01033 AC034232.1-201ENST00000506026 1064 ntBASIC21.01■□□□□ 0.95
TIMP1P01033 MIR4674-201ENST00000582457 87 ntBASIC21.01■□□□□ 0.95
TIMP1P01033 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMP1P01033 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMP1P01033 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.01■□□□□ 0.95
TIMP1P01033 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 AF106564.1-201ENST00000607058 2553 ntBASIC21.01■□□□□ 0.95
TIMP1P01033 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.01■□□□□ 0.95
TIMP1P01033 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.01■□□□□ 0.95
TIMP1P01033 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TIMP1P01033 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP1P01033 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TIMP1P01033 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21■□□□□ 0.95
TIMP1P01033 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21■□□□□ 0.95
TIMP1P01033 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21■□□□□ 0.95
TIMP1P01033 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21■□□□□ 0.95
TIMP1P01033 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21■□□□□ 0.95
TIMP1P01033 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21■□□□□ 0.95
TIMP1P01033 GPALPP1-207ENST00000611650 899 ntBASIC21■□□□□ 0.95
TIMP1P01033 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21■□□□□ 0.95
TIMP1P01033 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21■□□□□ 0.95
TIMP1P01033 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TIMP1P01033 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21■□□□□ 0.95
TIMP1P01033 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TIMP1P01033 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP1P01033 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMP1P01033 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TIMP1P01033 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.99■□□□□ 0.95
TIMP1P01033 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TIMP1P01033 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMP1P01033 AP002383.4-201ENST00000442518 975 ntBASIC20.99■□□□□ 0.95
TIMP1P01033 NUS1P1-201ENST00000446295 882 ntBASIC20.99■□□□□ 0.95
TIMP1P01033 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.99■□□□□ 0.95
TIMP1P01033 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.99■□□□□ 0.95
TIMP1P01033 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMP1P01033 AL117328.2-201ENST00000624617 1940 ntBASIC20.99■□□□□ 0.95
TIMP1P01033 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMP1P01033 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP1P01033 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.99■□□□□ 0.95
TIMP1P01033 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
TIMP1P01033 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TIMP1P01033 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.98■□□□□ 0.95
TIMP1P01033 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.98■□□□□ 0.95
TIMP1P01033 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.98■□□□□ 0.95
TIMP1P01033 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.98■□□□□ 0.95
TIMP1P01033 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.98■□□□□ 0.95
TIMP1P01033 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.98■□□□□ 0.95
TIMP1P01033 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.98■□□□□ 0.95
TIMP1P01033 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMP1P01033 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TIMP1P01033 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TIMP1P01033 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP1P01033 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP1P01033 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms