Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSPG5O95196 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSPG5O95196 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG5O95196 FAM8A6P-201ENST00000407496 1135 ntBASIC20.81■□□□□ 0.92
CSPG5O95196 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CSPG5O95196 KRT126P-201ENST00000549467 1181 ntBASIC20.81■□□□□ 0.92
CSPG5O95196 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG5O95196 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 AP000550.4-202ENST00000639755 178 ntBASIC20.81■□□□□ 0.92
CSPG5O95196 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG5O95196 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CSPG5O95196 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSPG5O95196 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CSPG5O95196 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CSPG5O95196 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.8■□□□□ 0.92
CSPG5O95196 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.8■□□□□ 0.92
CSPG5O95196 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.8■□□□□ 0.92
CSPG5O95196 KRT18P48-201ENST00000434763 852 ntBASIC20.8■□□□□ 0.92
CSPG5O95196 AC007663.1-201ENST00000438948 1240 ntBASIC20.8■□□□□ 0.92
CSPG5O95196 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.8■□□□□ 0.92
CSPG5O95196 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.8■□□□□ 0.92
CSPG5O95196 AC141257.4-201ENST00000634557 245 ntBASIC20.8■□□□□ 0.92
CSPG5O95196 AC136944.6-201ENST00000634818 245 ntBASIC20.8■□□□□ 0.92
CSPG5O95196 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CSPG5O95196 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSPG5O95196 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG5O95196 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CSPG5O95196 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSPG5O95196 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.79■□□□□ 0.92
CSPG5O95196 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.79■□□□□ 0.92
CSPG5O95196 AC009947.2-201ENST00000444014 672 ntBASIC20.79■□□□□ 0.92
CSPG5O95196 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSPG5O95196 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.79■□□□□ 0.92
CSPG5O95196 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CSPG5O95196 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG5O95196 IER3-202ENST00000376377 1350 ntBASIC20.79■□□□□ 0.92
CSPG5O95196 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.79■□□□□ 0.92
CSPG5O95196 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 AC092720.2-201ENST00000602388 1665 ntBASIC20.79■□□□□ 0.92
CSPG5O95196 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.79■□□□□ 0.92
CSPG5O95196 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSPG5O95196 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CSPG5O95196 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG5O95196 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 AC006128.1-201ENST00000624704 1661 ntBASIC20.78■□□□□ 0.92
CSPG5O95196 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.78■□□□□ 0.92
CSPG5O95196 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.78■□□□□ 0.92
CSPG5O95196 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG5O95196 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.78■□□□□ 0.92
CSPG5O95196 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG5O95196 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.78■□□□□ 0.92
CSPG5O95196 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.78■□□□□ 0.92
CSPG5O95196 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG5O95196 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CSPG5O95196 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.78■□□□□ 0.92
CSPG5O95196 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CSPG5O95196 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CSPG5O95196 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CSPG5O95196 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CSPG5O95196 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CSPG5O95196 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.77■□□□□ 0.92
CSPG5O95196 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 AC007225.1-201ENST00000566331 1836 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms