Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.39■□□□□ 0.86
BEST1O76090 FSCN1P1-201ENST00000568912 1481 ntBASIC20.39■□□□□ 0.85
BEST1O76090 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST1O76090 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.39■□□□□ 0.85
BEST1O76090 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST1O76090 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 SDHAP1-207ENST00000440850 2000 ntBASIC20.39■□□□□ 0.85
BEST1O76090 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST1O76090 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
BEST1O76090 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.39■□□□□ 0.85
BEST1O76090 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
BEST1O76090 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
BEST1O76090 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 KRT8P41-201ENST00000533985 1514 ntBASIC20.38■□□□□ 0.85
BEST1O76090 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 AC091390.4-202ENST00000476426 537 ntBASIC20.38■□□□□ 0.85
BEST1O76090 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.38■□□□□ 0.85
BEST1O76090 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.38■□□□□ 0.85
BEST1O76090 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.38■□□□□ 0.85
BEST1O76090 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BEST1O76090 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
BEST1O76090 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BEST1O76090 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BEST1O76090 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BEST1O76090 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BEST1O76090 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
BEST1O76090 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 AL390955.1-201ENST00000428694 934 ntBASIC20.37■□□□□ 0.85
BEST1O76090 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
BEST1O76090 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.37■□□□□ 0.85
BEST1O76090 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.37■□□□□ 0.85
BEST1O76090 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BEST1O76090 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 AC011298.2-201ENST00000617989 482 ntBASIC20.37■□□□□ 0.85
BEST1O76090 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.37■□□□□ 0.85
BEST1O76090 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.37■□□□□ 0.85
BEST1O76090 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
BEST1O76090 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.37■□□□□ 0.85
BEST1O76090 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BEST1O76090 Z82202.1-201ENST00000623446 1880 ntBASIC20.37■□□□□ 0.85
BEST1O76090 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
BEST1O76090 KRT8P9-201ENST00000558927 1449 ntBASIC20.36■□□□□ 0.85
BEST1O76090 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.36■□□□□ 0.85
BEST1O76090 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BEST1O76090 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 UNC93B2-201ENST00000285383 730 ntBASIC20.36■□□□□ 0.85
BEST1O76090 AC004951.3-201ENST00000418645 1148 ntBASIC20.36■□□□□ 0.85
BEST1O76090 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.36■□□□□ 0.85
BEST1O76090 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.36■□□□□ 0.85
BEST1O76090 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BEST1O76090 AC073912.3-201ENST00000624414 853 ntBASIC20.36■□□□□ 0.85
BEST1O76090 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.36■□□□□ 0.85
BEST1O76090 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
BEST1O76090 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BEST1O76090 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.36■□□□□ 0.85
BEST1O76090 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
BEST1O76090 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
BEST1O76090 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST1O76090 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST1O76090 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
BEST1O76090 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.35■□□□□ 0.85
BEST1O76090 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST1O76090 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST1O76090 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST1O76090 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BEST1O76090 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST1O76090 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms