Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
GFRA3O60609 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.87■□□□□ 0.61
GFRA3O60609 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
GFRA3O60609 AL160286.2-201ENST00000567150 934 ntBASIC18.87■□□□□ 0.61
GFRA3O60609 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.87■□□□□ 0.61
GFRA3O60609 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.87■□□□□ 0.61
GFRA3O60609 AL117328.2-201ENST00000624617 1940 ntBASIC18.87■□□□□ 0.61
GFRA3O60609 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA3O60609 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.86■□□□□ 0.61
GFRA3O60609 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GFRA3O60609 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.86■□□□□ 0.61
GFRA3O60609 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 AC092364.2-202ENST00000597012 1073 ntBASIC18.86■□□□□ 0.61
GFRA3O60609 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GFRA3O60609 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA3O60609 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.85■□□□□ 0.61
GFRA3O60609 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GFRA3O60609 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 RPSAP43-201ENST00000402237 625 ntBASIC18.85■□□□□ 0.61
GFRA3O60609 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.85■□□□□ 0.61
GFRA3O60609 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.85■□□□□ 0.61
GFRA3O60609 AC004967.1-201ENST00000453589 447 ntBASIC18.85■□□□□ 0.61
GFRA3O60609 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.85■□□□□ 0.61
GFRA3O60609 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GFRA3O60609 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFRA3O60609 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 AC080038.3-201ENST00000623346 1952 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GFRA3O60609 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GFRA3O60609 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
GFRA3O60609 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 AC127496.7-201ENST00000625110 1798 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA3O60609 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 GPX1P2-201ENST00000429271 606 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA3O60609 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.84■□□□□ 0.61
GFRA3O60609 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.84■□□□□ 0.61
GFRA3O60609 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.84■□□□□ 0.61
GFRA3O60609 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.84■□□□□ 0.61
GFRA3O60609 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.84■□□□□ 0.61
GFRA3O60609 SART3-203ENST00000546611 1184 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 AC009065.1-201ENST00000564055 1225 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 MIR3687-2-201ENST00000577708 61 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.84■□□□□ 0.61
GFRA3O60609 MIR3687-1-201ENST00000614492 61 ntBASIC18.84■□□□□ 0.61
GFRA3O60609 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
GFRA3O60609 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GFRA3O60609 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFRA3O60609 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms