Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.73■□□□□ 0.59
CDX4O14627 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 BX276092.5-203ENST00000456199 560 ntBASIC18.73■□□□□ 0.59
CDX4O14627 RASA4DP-201ENST00000460726 1199 ntBASIC18.73■□□□□ 0.59
CDX4O14627 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.73■□□□□ 0.59
CDX4O14627 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 MIR4674-201ENST00000582457 87 ntBASIC18.73■□□□□ 0.59
CDX4O14627 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CDX4O14627 AL121672.3-201ENST00000608644 468 ntBASIC18.73■□□□□ 0.59
CDX4O14627 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.73■□□□□ 0.59
CDX4O14627 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
CDX4O14627 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDX4O14627 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CDX4O14627 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDX4O14627 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDX4O14627 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
CDX4O14627 NUS1P1-201ENST00000446295 882 ntBASIC18.72■□□□□ 0.59
CDX4O14627 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.72■□□□□ 0.59
CDX4O14627 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.72■□□□□ 0.59
CDX4O14627 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.72■□□□□ 0.59
CDX4O14627 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 SMG8-203ENST00000578922 2178 ntBASIC18.72■□□□□ 0.59
CDX4O14627 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDX4O14627 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDX4O14627 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.71■□□□□ 0.59
CDX4O14627 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CDX4O14627 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.71■□□□□ 0.59
CDX4O14627 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDX4O14627 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CDX4O14627 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDX4O14627 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDX4O14627 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDX4O14627 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.71■□□□□ 0.59
CDX4O14627 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.71■□□□□ 0.59
CDX4O14627 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.71■□□□□ 0.59
CDX4O14627 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.71■□□□□ 0.59
CDX4O14627 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDX4O14627 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CDX4O14627 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDX4O14627 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDX4O14627 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDX4O14627 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDX4O14627 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDX4O14627 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDX4O14627 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
CDX4O14627 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.7■□□□□ 0.58
CDX4O14627 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.7■□□□□ 0.58
CDX4O14627 EMBP1-201ENST00000458200 901 ntBASIC18.7■□□□□ 0.58
CDX4O14627 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.7■□□□□ 0.58
CDX4O14627 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 AC104692.2-201ENST00000603054 253 ntBASIC18.7■□□□□ 0.58
CDX4O14627 IFNL4P1-201ENST00000607083 540 ntBASIC18.7■□□□□ 0.58
CDX4O14627 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.7■□□□□ 0.58
CDX4O14627 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDX4O14627 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CDX4O14627 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDX4O14627 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDX4O14627 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms