Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX39AO00148 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.84■■□□□ 1.09
DDX39AO00148 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
DDX39AO00148 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
DDX39AO00148 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX39AO00148 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.84■■□□□ 1.09
DDX39AO00148 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.84■■□□□ 1.09
DDX39AO00148 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
DDX39AO00148 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
DDX39AO00148 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
DDX39AO00148 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX39AO00148 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
DDX39AO00148 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.83■■□□□ 1.09
DDX39AO00148 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX39AO00148 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX39AO00148 RCC2P6-201ENST00000526625 1557 ntBASIC21.83■■□□□ 1.09
DDX39AO00148 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX39AO00148 MMP23A-201ENST00000234610 1017 ntBASIC21.83■■□□□ 1.09
DDX39AO00148 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX39AO00148 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX39AO00148 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
DDX39AO00148 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX39AO00148 AC026271.3-201ENST00000571884 352 ntBASIC21.83■■□□□ 1.09
DDX39AO00148 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX39AO00148 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.83■■□□□ 1.09
DDX39AO00148 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.83■■□□□ 1.09
DDX39AO00148 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.83■■□□□ 1.09
DDX39AO00148 AC073130.3-201ENST00000624389 2278 ntBASIC21.83■■□□□ 1.09
DDX39AO00148 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
DDX39AO00148 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.83■■□□□ 1.08
DDX39AO00148 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.83■■□□□ 1.08
DDX39AO00148 FSCN1P1-201ENST00000568912 1481 ntBASIC21.83■■□□□ 1.08
DDX39AO00148 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX39AO00148 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DDX39AO00148 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DDX39AO00148 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
DDX39AO00148 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX39AO00148 AC008040.2-201ENST00000461049 708 ntBASIC21.82■■□□□ 1.08
DDX39AO00148 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
DDX39AO00148 AC011298.2-201ENST00000617989 482 ntBASIC21.82■■□□□ 1.08
DDX39AO00148 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX39AO00148 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX39AO00148 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX39AO00148 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX39AO00148 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX39AO00148 AL160286.2-201ENST00000567150 934 ntBASIC21.81■■□□□ 1.08
DDX39AO00148 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX39AO00148 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
DDX39AO00148 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX39AO00148 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DDX39AO00148 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX39AO00148 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX39AO00148 AFG3L1P-217ENST00000557444 2447 ntBASIC21.8■■□□□ 1.08
DDX39AO00148 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 AC125437.2-201ENST00000625180 2167 ntBASIC21.8■■□□□ 1.08
DDX39AO00148 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX39AO00148 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms