Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBFOX3A6NFN3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 AL512353.2-201ENST00000448759 1962 ntBASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBFOX3A6NFN3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 UNC93B8-201ENST00000511903 705 ntBASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.28■□□□□ 0.04
RBFOX3A6NFN3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms