Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC163A0A0D9SF12 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC163A0A0D9SF12 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 KRT8P11-201ENST00000409686 1436 ntBASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 HBZP1-201ENST00000354915 429 ntBASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 SPDYE15P-201ENST00000424157 909 ntBASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 MIR3652-201ENST00000579335 131 ntBASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 AC012313.10-201ENST00000623509 926 ntBASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC163A0A0D9SF12 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 SPDYE13P-201ENST00000445314 798 ntBASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 PKD1P6-201ENST00000343738 4769 ntBASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC163A0A0D9SF12 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC163A0A0D9SF12 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms