Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AC097658.1-201ENST00000475555 843 ntBASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AC098934.4-201ENST00000564127 592 ntBASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 MYC-209ENST00000641252 345 ntBASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AC020763.4-201ENST00000623414 4170 ntBASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AL049812.1-201ENST00000432563 2267 ntBASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV27A0A087WT01 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.55■□□□□ 0.4
TRAV27A0A087WT01 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 AL138781.1-201ENST00000566567 1274 ntBASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 HLA-B-256ENST00000639848 1089 ntBASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV27A0A087WT01 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AP006587.1-201ENST00000534129 1502 ntBASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV27A0A087WT01 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms