Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC092162.3-201ENST00000624511 1624 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL583835.1-201ENST00000399570 407 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL607077.1-201ENST00000401718 499 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL136131.1-201ENST00000406079 803 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 Z98941.1-201ENST00000407764 100 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 RNA5SP36-201ENST00000410197 133 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SKP235-201ENST00000410662 305 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC022022.1-201ENST00000430304 178 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 ELOCP10-201ENST00000440624 327 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC009963.2-201ENST00000453431 138 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 RAD23BP3-201ENST00000454157 1152 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AP000926.1-201ENST00000479573 241 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SL459P-201ENST00000481078 302 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC069499.1-201ENST00000489433 509 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC092045.1-201ENST00000495716 1231 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC008958.1-201ENST00000511047 682 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 MIR4277-201ENST00000578298 84 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 ELOCP34-201ENST00000604436 327 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL034351.1-201ENST00000605288 668 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC022960.2-201ENST00000616300 666 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AL121890.3-201ENST00000618494 516 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 AC010435.1-201ENST00000623353 1177 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 MARK2P15-201ENST00000432204 2186 ntBASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DRB4X5D2U9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 OR11H4-201ENST00000315409 1082 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RNU4-39P-201ENST00000362455 127 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SKP177-201ENST00000410567 355 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RNU4-25P-201ENST00000410569 230 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AL732292.1-201ENST00000426692 226 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RPL23AP89-201ENST00000439324 255 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 EIF2S2P2-201ENST00000447161 982 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 TPT1P13-201ENST00000449760 499 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AC006463.2-201ENST00000473326 348 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SL691P-201ENST00000494487 301 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AC025674.1-201ENST00000507074 324 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 KCTD9P2-201ENST00000512203 1013 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RNA5SP49-201ENST00000516450 115 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RNA5SP519-201ENST00000516480 119 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RNA5SP143-201ENST00000516936 115 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 TRAV8-5-201ENST00000537369 341 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AC063950.1-201ENST00000552036 308 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 PSMB7P1-201ENST00000556349 514 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 TVP23BP1-201ENST00000557500 617 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AC027176.2-201ENST00000559166 746 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 MIR4700-201ENST00000578311 74 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 MIR4284-201ENST00000578924 81 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms