Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC125257.1-201ENST00000560400 2930 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ZNF137P-201ENST00000456718 1920 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 EIF2AP4-201ENST00000424793 1781 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 MIR124-3-201ENST00000384866 87 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 SDHCP2-201ENST00000398565 501 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 CCNB2P1-201ENST00000399411 1150 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 OR1F12-201ENST00000402365 945 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ZNF603P-201ENST00000405613 487 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 HNRNPDP2-201ENST00000406475 478 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL603766.1-201ENST00000407763 664 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL161631.1-201ENST00000417933 486 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC007559.1-201ENST00000428736 355 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ELOCP6-201ENST00000429066 328 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 NRBF2P3-201ENST00000432731 865 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL049745.1-201ENST00000433953 286 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 RPL23AP89-201ENST00000439324 255 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 YWHAZP2-201ENST00000440317 728 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC092647.3-201ENST00000443044 633 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 RPL23AP43-201ENST00000446445 471 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL121877.1-201ENST00000453704 622 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC133473.1-201ENST00000455173 299 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ELOCP12-201ENST00000458706 328 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 MTND4LP2-201ENST00000502312 285 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 VWA8P1-201ENST00000510889 176 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AP001880.2-201ENST00000538233 448 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AP003117.2-201ENST00000606010 545 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC009163.6-201ENST00000612367 342 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AL359715.5-201ENST00000623431 443 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AC112694.2-201ENST00000623697 768 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 MTCO1P14-201ENST00000441695 1559 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 Z82217.1-201ENST00000625157 8149 ntBASIC3.54□□□□□ -1.84
RCL1Q9Y2P8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 RNU4-39P-201ENST00000362455 127 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 GLULP6-201ENST00000399502 913 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 MIR1178-201ENST00000408396 91 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 AP000357.1-201ENST00000409926 1165 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 RPL31P45-201ENST00000419532 356 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 TPTE2P6-202ENST00000445572 1007 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 OR52J1P-201ENST00000450596 932 ntBASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.53□□□□□ -1.84
RCL1Q9Y2P8 AC012170.1-201ENST00000495139 359 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms