Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 BTG4P1-201ENST00000510421 183 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AC124312.6-202ENST00000623624 418 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AC006484.1-201ENST00000435086 1884 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AP004289.2-201ENST00000444413 1457 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AC236972.1-201ENST00000433225 199 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AC104306.1-201ENST00000449702 371 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 GTF2IP8-201ENST00000560687 584 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 BNIP3P41-202ENST00000616656 861 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 DDX18P6-201ENST00000450119 1997 ntBASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SHANK2Q9UPX8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AL122016.1-201ENST00000403365 367 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 RPS29P4-201ENST00000414733 161 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AL139247.1-201ENST00000422768 325 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 MAPRE1P3-201ENST00000435438 796 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AC018635.1-201ENST00000468292 1030 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AC008802.1-201ENST00000519121 791 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 OR8I1P-201ENST00000529291 931 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 ELOCP35-201ENST00000604289 336 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 SCARNA15.3-201ENST00000626315 122 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 SCARNA4.1-201ENST00000628597 123 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 USP8P1-201ENST00000494673 3183 ntBASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHANK2Q9UPX8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AC245052.5-201ENST00000416320 649 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AL591419.1-201ENST00000427423 339 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 RN7SL271P-201ENST00000487601 295 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 HMGN1P15-201ENST00000513870 295 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AC092354.2-201ENST00000607786 514 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 TCP1P3-201ENST00000414406 1498 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 ZNF833P-201ENST00000424938 1494 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 AP002001.2-201ENST00000529025 1469 ntBASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHANK2Q9UPX8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AC007066.2-202ENST00000566531 914 ntBASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 MIR5187-201ENST00000583479 76 ntBASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AC006363.1-201ENST00000603806 463 ntBASIC5.85□□□□□ -1.47
SHANK2Q9UPX8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms