Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIMD1Q9UGP4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RNA5SP435-201ENST00000364044 108 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RNU4-66P-201ENST00000365199 138 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 U3.20-201ENST00000390909 217 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RNU6-907P-201ENST00000390924 102 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RPL34P3-201ENST00000421454 338 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 OR4K11P-201ENST00000431829 904 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AL645939.3-201ENST00000435408 225 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 GAPDHP20-201ENST00000444107 1007 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 POU5F1P5-201ENST00000445059 658 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 snoU13.8-201ENST00000458890 104 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC126389.1-201ENST00000477436 290 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RN7SL379P-201ENST00000479912 293 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RN7SL413P-201ENST00000482700 297 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC005912.1-201ENST00000495392 255 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 HMGN1P16-201ENST00000508308 283 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC021146.1-201ENST00000511202 716 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC093664.1-201ENST00000511779 289 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RNU6-988P-201ENST00000519081 107 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 SNRPGP18-201ENST00000553000 214 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC004817.2-201ENST00000561794 651 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 OR4K8P-201ENST00000578842 1048 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC007448.1-201ENST00000582714 234 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AP001029.3-201ENST00000588063 596 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 7SK.7-201ENST00000603504 247 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC022400.9-201ENST00000623633 273 ntBASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIMD1Q9UGP4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC011460.1-201ENST00000636268 1834 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC016745.2-201ENST00000608834 3443 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RNU6-1017P-201ENST00000363613 106 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 Y_RNA.301-201ENST00000364990 103 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 Y_RNA.373-201ENST00000365600 103 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RNU4-20P-201ENST00000365601 151 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AL592114.1-201ENST00000403842 483 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RPL12P23-201ENST00000405880 490 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RPL36AP36-201ENST00000418616 301 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC012065.2-201ENST00000421295 375 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC107399.1-201ENST00000451226 265 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC099340.1-201ENST00000475247 599 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RNA5SP278-201ENST00000517055 102 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC022634.1-201ENST00000520765 532 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC112191.2-201ENST00000522428 333 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC007068.2-201ENST00000543168 395 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 DNAJC8P1-201ENST00000554535 372 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 AP005119.1-201ENST00000580956 292 ntBASIC7.15□□□□□ -1.26
LIMD1Q9UGP4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms