Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IPMKP1-201ENST00000425988 855 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC105402.2-201ENST00000438503 358 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC006466.1-201ENST00000438721 289 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 HMGB1P48-201ENST00000446155 598 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 MRPL35P4-201ENST00000453682 566 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 NIP7P2-201ENST00000485801 544 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RNA5SP464-201ENST00000516251 108 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RN7SKP96-201ENST00000516948 297 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC087894.1-201ENST00000538359 518 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC068993.1-201ENST00000546724 589 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC104072.1-201ENST00000568817 668 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC027455.1-201ENST00000574104 594 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC007448.1-201ENST00000582714 234 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC133552.5-201ENST00000604266 540 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AL133338.2-201ENST00000604292 736 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 BNIP3P4-201ENST00000604946 565 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 SNORD91B-202ENST00000608459 222 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 LINC01808-202ENST00000641680 1116 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 XPOTP1-201ENST00000443317 2398 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
BLOC1S4Q9NUP1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 CPHL1P-201ENST00000461341 3407 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 OR4K17-201ENST00000315543 1032 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC079741.1-201ENST00000321498 212 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 SNORD113.2-201ENST00000364166 89 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 Z98745.1-201ENST00000402553 494 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC044797.1-201ENST00000445744 679 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC073264.2-201ENST00000448886 166 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC008280.2-201ENST00000455473 307 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC008885.2-201ENST00000509506 930 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC112206.4-201ENST00000515142 405 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 OR5AN2P-201ENST00000534535 896 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 SERPINE4P-201ENST00000554978 281 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 BNIP3P32-201ENST00000600015 554 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AP002360.3-201ENST00000607673 710 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AL109620.1-201ENST00000618738 1197 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC253576.2-201ENST00000618815 580 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AC140113.4-201ENST00000622087 222 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AP003476.1-201ENST00000623984 516 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 AP000843.1-201ENST00000624880 701 ntBASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BLOC1S4Q9NUP1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RN7SKP115-201ENST00000363177 317 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RN7SKP103-201ENST00000363848 320 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms