Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM7Q9NR12 AC092070.2-203ENST00000598377 3644 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 RNU6-666P-201ENST00000363499 107 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 RNVU1-6-201ENST00000364688 164 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 RPS27AP11-201ENST00000402798 447 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LINC02210-201ENST00000444561 288 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 VN1R34P-201ENST00000447387 883 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC005832.3-201ENST00000537929 631 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 BNIP3P1-201ENST00000547295 580 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC005084.1-201ENST00000605160 304 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC068276.1-201ENST00000605793 379 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC023158.2-201ENST00000614876 543 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC138907.8-201ENST00000623981 2256 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 OR55B1P-203ENST00000641518 2602 ntBASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM7Q9NR12 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AL355488.2-201ENST00000609909 2850 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AP005432.1-201ENST00000580891 3485 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 RNU6-1042P-201ENST00000384204 107 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC013404.1-201ENST00000413068 249 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 MRPS36P1-201ENST00000421291 307 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 RPL7P56-201ENST00000429441 717 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 MTND1P2-201ENST00000430604 821 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 FTLP19-201ENST00000433300 394 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 HMGB1P45-201ENST00000435986 653 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 USP9YP22-201ENST00000438971 294 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 RPL31P44-201ENST00000447680 377 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 ARL2BPP4-201ENST00000506854 471 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC104108.1-201ENST00000509930 412 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 RNA5SP116-201ENST00000516132 98 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 OR4R3P-201ENST00000525084 838 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC063949.1-201ENST00000552900 865 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AP005403.1-201ENST00000579720 229 ntBASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM7Q9NR12 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms