Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR6839-201ENST00000620425 113 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC015804.1-201ENST00000622935 435 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC139792.2-201ENST00000624218 587 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 OR2L1P-202ENST00000641567 1023 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC120338.1-201ENST00000625074 1541 ntBASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM54Q9BYV2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 RPL23AP47-201ENST00000408017 460 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 RN7SKP182-201ENST00000410772 298 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 SKP1P3-201ENST00000429280 487 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CLUHP1-201ENST00000435012 1190 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CYCSP12-201ENST00000437729 300 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC092013.1-201ENST00000438795 332 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL445567.1-201ENST00000439121 144 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 UBE2D3P4-201ENST00000441973 436 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 SPRYD7P1-201ENST00000443861 570 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 NPM1P39-201ENST00000449818 867 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL035090.1-201ENST00000454835 332 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC010307.1-201ENST00000467206 836 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 RPL7P39-201ENST00000481157 744 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC111000.2-201ENST00000507775 550 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC011411.1-201ENST00000509592 876 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 XKRY-201ENST00000510392 1100 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 RPL7L1P13-201ENST00000511702 739 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL671862.1-201ENST00000515851 349 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC012400.1-201ENST00000518452 381 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 ISCA1P3-201ENST00000577104 373 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 SNORD95-201ENST00000579879 68 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 RN7SL708P-201ENST00000580952 299 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL358072.1-201ENST00000604156 575 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC245008.1-201ENST00000608123 476 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AC122133.1-201ENST00000613964 233 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 AL450345.1-202ENST00000605741 3881 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 ZNF542P-204ENST00000482727 1305 ntBASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM54Q9BYV2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM54Q9BYV2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 BMS1P3-201ENST00000372011 932 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 RNU1-74P-201ENST00000384108 171 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 RNU1-149P-201ENST00000390870 161 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 AL390774.1-201ENST00000411924 246 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 RPL6P29-201ENST00000414863 865 ntBASIC5.15□□□□□ -1.59
TRIM54Q9BYV2 AL121878.1-201ENST00000418638 859 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms