Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LITAFQ99732 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.55□□□□□ -1.84
LITAFQ99732 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.55□□□□□ -1.84
LITAFQ99732 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LITAFQ99732 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC005294.1-201ENST00000355509 281 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 Y_RNA.3-201ENST00000362331 103 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RNU1-65P-201ENST00000363919 148 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 Y_RNA.359-201ENST00000365498 102 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RNA5SP279-201ENST00000365513 117 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SUGT1P2-201ENST00000379452 992 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.55□□□□□ -1.84
LITAFQ99732 RNU6-1119P-201ENST00000384349 108 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 RPL23AP29-201ENST00000397284 453 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 U3.32-201ENST00000408116 212 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RN7SKP125-201ENST00000410481 302 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AL139135.1-201ENST00000412675 209 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC062016.2-201ENST00000420950 676 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AL133325.1-201ENST00000421090 382 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.55□□□□□ -1.84
LITAFQ99732 C8orf59P1-201ENST00000429930 303 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.55□□□□□ -1.84
LITAFQ99732 LARP1BP3-201ENST00000437229 869 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC019185.3-201ENST00000438805 323 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 USP9YP29-201ENST00000445112 563 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 ST13P20-201ENST00000447996 1065 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC005077.1-201ENST00000449226 375 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 CFTRP1-201ENST00000456646 183 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RPL37P3-201ENST00000456825 293 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 NF1P3-201ENST00000457709 450 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 RPS12P20-201ENST00000464109 380 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SRRM1P2-201ENST00000464531 1192 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AP003385.3-201ENST00000472498 287 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RPL21P6-201ENST00000479171 504 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 RPL5P22-201ENST00000480199 884 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RPL7P6-201ENST00000480903 738 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 HMGN2P25-201ENST00000486956 268 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 UBA52P3-201ENST00000491303 382 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC073073.1-201ENST00000493920 463 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC005912.1-201ENST00000495392 255 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC114324.2-202ENST00000503812 134 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 HMGB1P28-201ENST00000507778 552 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 HMGB1P44-201ENST00000508597 572 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SNORA48.10-201ENST00000516965 160 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 SLC2A13P1-201ENST00000531560 322 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 OR6C7P-201ENST00000547875 934 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AL390334.1-201ENST00000556395 450 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.55□□□□□ -1.84
LITAFQ99732 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AP005403.1-201ENST00000579720 229 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 RN7SL356P-201ENST00000582228 248 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC115085.1-201ENST00000588924 229 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LITAFQ99732 AC087683.1-201ENST00000591187 441 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC3.55□□□□□ -1.84
LITAFQ99732 AP003465.2-201ENST00000602571 373 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC009027.1-201ENST00000604510 479 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AL354760.1-201ENST00000608357 643 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SNORD91B-202ENST00000608459 222 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC012360.2-201ENST00000609349 391 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC015819.1-201ENST00000613588 663 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 MIR6731-201ENST00000614863 72 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC089999.3-201ENST00000622440 577 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 AC120349.2-201ENST00000625002 298 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 DLST-216ENST00000626051 252 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 ASB8-218ENST00000629941 278 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC026634.1-201ENST00000634369 198 ntBASIC3.55□□□□□ -1.84
LITAFQ99732 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
LITAFQ99732 SAMMSON-209ENST00000641222 1100 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms