Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MRPL35P4-201ENST00000453682 566 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC008953.1-201ENST00000497334 318 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC023632.1-201ENST00000518463 375 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 IGJP1-201ENST00000522682 475 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 OR8A2P-201ENST00000528631 952 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC093799.2-201ENST00000610062 578 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC009229.4-201ENST00000623854 1947 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 CASC19-206ENST00000641028 1430 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 LINC01739-205ENST00000641890 573 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 ECM1P2-201ENST00000503354 1577 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC107068.1-201ENST00000563286 4218 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RNU1-106P-201ENST00000384382 164 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AL590290.1-201ENST00000405336 380 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RN7SKP213-201ENST00000410746 298 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC093162.1-201ENST00000419682 124 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 PPIAP13-201ENST00000434706 478 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 TPTE2P6-202ENST00000445572 1007 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RHEBP2-201ENST00000450289 600 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RPSAP50-201ENST00000481955 852 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC069304.1-201ENST00000491593 704 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AL035404.1-201ENST00000497982 568 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RNA5SP43-201ENST00000516559 110 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RN7SKP147-201ENST00000517154 244 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 OSBPL9P5-201ENST00000542581 171 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC116553.2-201ENST00000564203 463 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC099676.1-201ENST00000608886 657 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AL592148.2-201ENST00000612210 372 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AL049794.2-201ENST00000616301 365 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC100778.3-201ENST00000580060 1750 ntBASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP3Q96JB5 AC012321.1-201ENST00000561622 1588 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MTND4P31-201ENST00000425607 1343 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RNA5SP507-201ENST00000363603 121 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RNU4-40P-201ENST00000364351 143 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 snoZ40.1-201ENST00000364540 72 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MIR765-201ENST00000390226 114 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MIR1178-201ENST00000408396 91 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 GJA6P-201ENST00000415117 1042 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 GAPDHP49-201ENST00000421421 961 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC009965.2-201ENST00000425328 970 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC007327.1-201ENST00000447461 264 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC073850.1-201ENST00000449243 255 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MRPL42P4-201ENST00000453267 443 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RN7SL799P-201ENST00000475891 298 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RN7SL319P-201ENST00000480656 221 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms