Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AC087465.1-201ENST00000560574 245 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AP005262.1-201ENST00000582646 997 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HPS3Q969F9 BNIP3P26-201ENST00000600827 554 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AP003973.1-201ENST00000604639 691 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 AL355816.1-201ENST00000607951 118 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AP004247.3-201ENST00000608682 624 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 AC107075.1-201ENST00000613695 314 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 CR392039.4-201ENST00000624968 501 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 LINC01739-205ENST00000641890 573 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
HPS3Q969F9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HPS3Q969F9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.57□□□□□ -1.52
HPS3Q969F9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HPS3Q969F9 AC021242.1-201ENST00000507315 2035 ntBASIC5.57□□□□□ -1.52
HPS3Q969F9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HPS3Q969F9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC005005.4-201ENST00000623789 16698 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 RN7SKP113-201ENST00000363891 295 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 DPPA2P3-201ENST00000411853 655 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.56□□□□□ -1.52
HPS3Q969F9 USP9YP31-201ENST00000431405 881 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC104306.1-201ENST00000449702 371 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 ATG12P2-201ENST00000456830 416 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC097484.1-201ENST00000471148 389 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC108734.3-201ENST00000481241 1165 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.56□□□□□ -1.52
HPS3Q969F9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 RNA5SP43-201ENST00000516559 110 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AP006245.2-201ENST00000522004 300 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AP003461.1-201ENST00000528866 78 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 OR4C2P-201ENST00000530855 1064 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.56□□□□□ -1.52
HPS3Q969F9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 HAUS8P1-201ENST00000549005 542 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 DUXAP6-201ENST00000553858 601 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC006349.1-201ENST00000555526 235 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.56□□□□□ -1.52
HPS3Q969F9 MIR4700-201ENST00000578311 74 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 MIR4691-201ENST00000583764 85 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC112694.2-201ENST00000623697 768 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.56□□□□□ -1.52
HPS3Q969F9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
HPS3Q969F9 Z99496.1-201ENST00000469424 1477 ntBASIC5.56□□□□□ -1.52
HPS3Q969F9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.56□□□□□ -1.52
HPS3Q969F9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HPS3Q969F9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HPS3Q969F9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HPS3Q969F9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HPS3Q969F9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HPS3Q969F9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HPS3Q969F9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HPS3Q969F9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms