Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 AC110994.2-201ENST00000635481 492 ntBASIC10.31□□□□□ -0.76
TRIM41Q8WV44 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 POT1-202ENST00000393329 3950 ntTSL 5 BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 NSRP1P1-201ENST00000444067 1693 ntBASIC10.31□□□□□ -0.76
TRIM41Q8WV44 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC10.31□□□□□ -0.76
TRIM41Q8WV44 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.126-201ENST00000363382 111 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AL035410.1-201ENST00000427409 427 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 DNAJC19P8-201ENST00000452887 259 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 RN7SL165P-201ENST00000477476 291 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC108120.2-201ENST00000512973 294 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.693-201ENST00000516641 110 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 OR5AP1P-201ENST00000529730 940 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 KPNA2P3-201ENST00000584190 848 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TRIM41Q8WV44 AL359091.1-201ENST00000449048 1734 ntBASIC10.3□□□□□ -0.76
TRIM41Q8WV44 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.1-201ENST00000352915 104 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.132-201ENST00000363421 102 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 IARS-201ENST00000375627 697 ntTSL 3 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 RNU6-723P-201ENST00000383973 107 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 RNU6-878P-201ENST00000384578 110 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 RPS3AP3-201ENST00000411933 242 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 RPS15AP30-201ENST00000420976 390 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 OR52B5P-201ENST00000435337 951 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AL512605.1-202ENST00000441919 381 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AL359955.2-201ENST00000445380 353 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AL121877.1-201ENST00000453704 622 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AC114981.1-201ENST00000503897 678 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 RNU6-1281P-201ENST00000516223 105 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 IGHVIII-2-1-201ENST00000518843 291 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 ARL1-211ENST00000551828 776 ntTSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 MIR3668-201ENST00000582138 75 ntBASIC10.29□□□□□ -0.76
TRIM41Q8WV44 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC10.29□□□□□ -0.76
TRIM41Q8WV44 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 LCOR-201ENST00000286067 4542 ntBASIC10.28□□□□□ -0.76
TRIM41Q8WV44 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.67-201ENST00000362870 100 ntBASIC10.28□□□□□ -0.76
TRIM41Q8WV44 Y_RNA.72-201ENST00000362894 103 ntBASIC10.28□□□□□ -0.76
TRIM41Q8WV44 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 AC104297.1-201ENST00000393779 870 ntBASIC10.28□□□□□ -0.76
TRIM41Q8WV44 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 IL6-203ENST00000401651 539 ntTSL 2 BASIC10.28□□□□□ -0.76
TRIM41Q8WV44 RPL23AP47-201ENST00000408017 460 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms