Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBE3DQ7Z6J8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBE3DQ7Z6J8 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.88□□□□□ -1.47
UBE3DQ7Z6J8 AC073365.1-203ENST00000641055 1992 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC024587.1-201ENST00000505925 2157 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC022031.1-201ENST00000585985 2593 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 FRG1BP-201ENST00000278882 761 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OR9K1P-201ENST00000326513 941 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 FRG1CP-201ENST00000358464 769 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-451P-201ENST00000362921 107 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RN7SKP171-201ENST00000364417 303 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL360271.1-201ENST00000395679 510 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL136131.1-201ENST00000406079 803 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RNU2-28P-201ENST00000410457 189 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OR51AB1P-201ENST00000429046 620 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC140076.1-201ENST00000449897 361 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RPL23AP12-201ENST00000467573 473 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC005017.1-201ENST00000482002 490 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 FAM172BP-201ENST00000487497 1089 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 RPS27P20-201ENST00000492051 246 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AF279873.1-201ENST00000523393 313 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OR4A12P-201ENST00000530847 918 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC008127.2-201ENST00000549925 1075 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 HIF1AP1-201ENST00000553642 175 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 MIR4701-201ENST00000583094 63 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AL161734.1-201ENST00000609720 557 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC021106.3-201ENST00000623925 531 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC111152.1-202ENST00000635848 339 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 SSXP3-201ENST00000442971 1300 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC024560.2-201ENST00000507981 1497 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AC024651.2-201ENST00000562480 2098 ntBASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBE3DQ7Z6J8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 TTC41P-205ENST00000551270 3963 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC092724.1-201ENST00000624623 3397 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 HSPD1P8-201ENST00000400121 1658 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL645937.1-201ENST00000641739 1652 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms