Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC097504.2-201ENST00000608088 454 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC007497.1-201ENST00000610421 561 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC004943.3-201ENST00000624116 600 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC046144.1-201ENST00000478559 1853 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 CASC19-261ENST00000641853 1638 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC027290.2-201ENST00000623210 18662 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 DDX18P5-201ENST00000534547 1306 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 SEC63P2-201ENST00000503863 1939 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL359922.3-201ENST00000624779 1670 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 RNU6-1000P-201ENST00000391066 106 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL357515.1-201ENST00000402967 542 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 UBE2V1P9-201ENST00000414760 368 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC004448.2-201ENST00000422360 586 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 OR5AW1P-201ENST00000426334 1006 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC093414.1-201ENST00000434712 514 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 EIF2S2P2-201ENST00000447161 982 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 PPIAP3-201ENST00000450588 505 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 OTX2P1-201ENST00000450956 354 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 GTF2IP12-201ENST00000456547 356 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 RPS3AP41-201ENST00000462701 778 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL035404.1-201ENST00000497982 568 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC119751.4-201ENST00000507498 357 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC009117.1-201ENST00000563948 554 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AP000919.1-202ENST00000581139 1264 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MIR4436B2-201ENST00000581415 91 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MIR4436B1-201ENST00000583272 91 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MIR4443-201ENST00000585052 53 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MIR8069-1-201ENST00000616627 86 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 STMN1P1-201ENST00000617809 440 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 MIR8069-2-201ENST00000621412 86 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL049536.1-201ENST00000625043 744 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL590396.2-201ENST00000636511 1041 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 XPOTP1-201ENST00000443317 2398 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 AL672167.1-204ENST00000641875 3017 ntBASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP54Q7Z3B4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP391-201ENST00000363456 119 ntBASIC4.47□□□□□ -1.69
NUP54Q7Z3B4 AC234772.1-201ENST00000377927 937 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms